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Researchers from the University of California Davis confirmed that macaque milk contains cytoplasmic crescents and that ample high-quality R...

Researchers from the University of California Davis confirmed that macaque milk contains cytoplasmic crescents and that ample high-quality R.

RNA sequencing of 750-year-old barley virus sheds new light on the Crusades

RNA sequencing of barley virus sheds new light on the Crusades

Accurate quantification of gene expression by qRT-PCR relies on normalization against a consistently expressed control gene. However, contro...

Accurate quantification of gene expression by qRT-PCR relies on normalization against a consistently expressed control gene. However, contro.

RNA-Seq Summit 18-20 June 2013 / RNA-Seq by Hanson Wade

RNA-Seq Summit 18-20 June 2013 / RNA-Seq by Hanson Wade

One of the concerns of assembling de novo transcriptomes is determining the amount of read sequences required to ensure a comprehensive cove...

One of the concerns of assembling de novo transcriptomes is determining the amount of read sequences required to ensure a comprehensive cove.

Case Western Reserve School of Medicine- Study Shows Autistic Brains Create More Information at Rest

Case Western - Biomedical Postbaccalaureate Research Education Program: Scholars enjoy mentored research experience, graduate courses, GRE workshops, and a variety of venues to interact with and learn from some of the best researchers in the world.

Illumina Next-Generation Sequencing Seminar | RNA-Seq Blog

Illumina Next-Generation Sequencing Seminar

In this study, researchers at the Fudan University, China report their analysis of RNA-Seq data from 92 ERCC controls spiked in a diverse collection of 447 RNA samples from eight ongoing studies involving five species (human, rat, mouse, chicken, and Schistosoma japonicum) and two mRNA enrichment protocols, i.e., poly(A) and RiboZero. The entire collection of datasets consisted of 15650143175 short sequence reads, 131603796 (i.e., 0.84%) of which were mapped to the 92 ERCC references. The…

In this study, researchers at the Fudan University, China report their analysis of RNA-Seq data from 92 ERCC controls spiked in a diverse collection of 447 RNA samples from eight ongoing studies involving five species (human, rat, mouse, chicken, and Schistosoma japonicum) and two mRNA enrichment protocols, i.e., poly(A) and RiboZero. The entire collection of datasets consisted of 15650143175 short sequence reads, 131603796 (i.e., 0.84%) of which were mapped to the 92 ERCC references. The…

Trackster - a team of researchers from Emory University, Penn State University, and the Galaxy team have developed Trackster, a visual analysis environment for next-generation sequencing data that tightly couples interactive visualization with data analysis. Using Trackster, selected data subsets, rather than complete data sets, can be analyzed, thereby reducing analysis computation time from days to seconds.

Trackster - a team of researchers from Emory University, Penn State University, and the Galaxy team have developed Trackster, a visual analysis environment for next-generation sequencing data that tightly couples interactive visualization with data analysis. Using Trackster, selected data subsets, rather than complete data sets, can be analyzed, thereby reducing analysis computation time from days to seconds.

A Guide to the Epigenome - September was a monumental month for genome aficionados. The National Human Genome Research Institute (NHGRI)–funded Encyclopedia of DNA Elements (ENCODE) Project released 30 papers in the pages of Nature, Genome Biology, Genome Research, plus another nine in Science, Cell, and the Journal of Biological Chemistry detailing functional features across the human genome. In all, ENCODE researchers performed nearly 1,650 experiments on 147 cell lines assessing...

Perkel at The Scientist September was a monumental month for genome aficionados. The National Human Genome Research Institute (NHGRI)–funded

Bioinformatics courses, boot camps and workshops presented by the University of California, Davis Bioinformatics Core    RNA-seq has emerged as a standard tool to study transcriptomes through massively parallel sequencing. The ability to generate millions of cDNA sequences makes it possible to study novel organisms as well as model organisms with unprecedented sensitivity and reproducibility. In this bootcamp, we will introduce the basic concepts of RNA-Seq and illustrate data analysis…

Bioinformatics courses, boot camps and workshops presented by the University of California, Davis Bioinformatics Core RNA-seq has emerged as a standard tool to

Biotechnology Training Courses at the National Institutes of Health    This course will introduce students to bioinformatic analysis of next generation sequencing data, particularly for DNA-seq, RNA-seq, CHIP-seq, and epigenomics. The course will be comprised of lectures and hand-on sessions. Lectures will cover background knowledge and survey various software programs. For hand-on sessions, command line tools will be presented and the galaxy web based platform will be used to analyze…

The GENCODE Consortium aims to identify all gene features in the human genome using a combination of computational analysis, manual annotation, and experimental validation.

RNA: The genome’s rising stars | RNA-Seq Blog

RNA: The genome’s rising stars

The symposium on Microgenomics will be held on 15-16 May 2014, at the Pierre and Marie Curie University, in the heart of the city of Paris. ...

The symposium on Microgenomics will be held on May at the Pierre and Marie Curie University, in the heart of the city of Paris.

MOUNTAIN VIEW, Calif., Oct. 21, 2013 /PRNewswire/ – Clontech Laboratories, Inc., a wholly-owned subsidiary of Takara Bio Inc., today announc...

MOUNTAIN VIEW, Calif., Oct. 21, 2013 /PRNewswire/ – Clontech Laboratories, Inc., a wholly-owned subsidiary of Takara Bio Inc., today announc...

RNA-Seq allows the identification of intronic causative mutations missed by the usual filtering of Whole Exome Sequencing

RNA-Seq allows the identification of intronic causative mutations missed by the usual filtering of Whole Exome Sequencing

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